| 1 |  FC SLOVAN LIBEREC | 11 | 9 | 1 | 1 | 50:9 | 28 |
| 2 |  FK Meteor Praha VIII | 11 | 8 | 2 | 1 | 25:8 | 26 |
| 3 |  FK Teplice B | 11 | 8 | 1 | 2 | 48:22 | 25 |
| 4 |  FC Hradec Králové - mládež B | 11 | 7 | 3 | 1 | 26:18 | 24 |
| 5 |  FK VIAGEM Ústí n. L. - mládež | 12 | 8 | 0 | 4 | 25:31 | 24 |
| 6 |  VIKTORIA PLZEŇ - fotbal B | 11 | 7 | 2 | 2 | 36:20 | 23 |
| 7 |  CU Bohemians Praha | 11 | 7 | 0 | 4 | 42:23 | 21 |
| 8 |  FC TEMPO PRAHA | 11 | 6 | 2 | 3 | 35:21 | 20 |
| 9 |  MFK Chrudim | 11 | 6 | 0 | 5 | 17:23 | 18 |
| 10 |  FC Táborsko akademie | 11 | 5 | 2 | 4 | 31:32 | 17 |
| 11 |  FK Mladá Boleslav B | 12 | 4 | 1 | 7 | 29:30 | 13 |
| 12 |  FK PARDUBICE B | 11 | 4 | 1 | 6 | 30:32 | 13 |
| 13 |  FK DUKLA Praha B | 11 | 4 | 1 | 6 | 21:24 | 13 |
| 14 |  SK Motorlet Praha | 11 | 4 | 0 | 7 | 24:40 | 12 |
| 15 |  FA Jablonec | 11 | 3 | 1 | 7 | 18:25 | 10 |
| 16 |  SK Kladno | 11 | 3 | 0 | 8 | 17:25 | 9 |
| 17 |  1.FK Příbram FA | 11 | 2 | 3 | 6 | 25:34 | 9 |
| 18 |  FC Sellier & Bellot Vlašim | 11 | 2 | 1 | 8 | 18:43 | 7 |
| 19 |  SK Dynamo Č. Budějovice akademie B | 11 | 1 | 3 | 7 | 13:28 | 6 |
| 20 |  TJ Malše Roudné | 11 | 1 | 0 | 10 | 17:59 | 3 |